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    Immunochemistry on paraffin sections

    Miquel Vila, Joan Compte, Marta Gonzalez-Sepulveda

    Published: 2022-09-13 DOI: 10.17504/protocols.io.kxygx9my4g8j/v1
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    Abstract

    Immunochemistry protocol on paraffin-embedded rat brain sections

    Steps

    1. Deparaffinization and hydratation :

    1.

    Put the slides 30 min in the incubator at 60ºC.

    2.

    Wash 3x3 min in Xilen.

    3.

    Wash 1x10 min in ethanol 100%.

    4.

    Wash 1x10 min in ethanol 95%.

    5.

    Wash 1x5 min in ethanol 70%.

    6.

    Wash 2x5 min in TBS 1X.

    2. Blocking endogenous peroxidase:

    7.

    Put the slides 10 min in endogenous peroxidase blocking solution: TBS 1x + 3% H2O2 + 10% methanol

    Wahsing

    8.

    Wash 3x5 min in buffer TBS 1X.

    Antigen retrieval

    9.

    Put sections in 200 mL of citrate buffer 10mM, pH 6

    9.1.

    Put sections in a boiling water bath for 20 min

    10.

    Let sections cool down for 20 min at RT

    Washing

    11.

    Wash 3x5 min in TBS 1X.

    Blocking

    12.

    Put wet paper in a black box for immunohistochemistry

    13.

    Gently dry and circle sections with the hydrophobic pen ImmEdge Vector H 4000 without touching the tissue

    14.

    Blocking in TBS 1X + 5% NGS (200uL/slides) 1h at RT

    1ary antibody

    15.

    Gently wipe off the water ofthe slides

    16.

    Put 200ul/slide of TBS 1X + 2% NGS + primary Ab48/72h (it depends of the Ab) at 4ºC (cold room)

    Washing

    17.

    Wash 3x5min in TBS 1X Buffer.

    2ary antibody

    18.

    Gently wipe off the water ofthe slides

    19.

    Put 200ul/slide TBS 1X + 2% NGS + Secondary Ab 1h at RT .

    19.1.

    At this step it is important to prepare ABC solution and let it, at least, 30 min on the shaker

    20.

    3x5min in TBS 1X

    Peroxidase staining

    21.

    Incubate 1 hour at RT with ABC solution (4drops A/B in 10 mL of TBS 1x)

    22.

    3x5min in TBS 1X

    Developing preparation

    23.

    In aluminium foil: DAB Standard Kit: 1 drop of reagent B in 1 mL of reagent A (gives rise to brown staining)

    23.1.

    In aluminium foil: Vector SG: 3 drops Chromogen + 3 drops Hydrogen Peroxide in 5mL PBS (gives rise to blue staining)

    Developing

    24.

    Cover tray plates with aluminium foil

    24.1.

    Put 200 uL on each section and put a cardboard box on it to keep darkness for a time ranging from 3-15 minutes depending on the antibody used

    24.2.

    Remove with an air-pump equipment and clean the material with bleach

    25.

    3x5min in TBS 1X

    Dehydratation

    26.

    1 min in ethanol 70%

    27.

    1 min in ethanol 95%

    28.

    1 min in ethanol 100%.

    29.

    2x5 min in xylene

    Mounting

    30.

    Puta line of mounting medium(DPX) byslide.Put the coverslip (washed with ethanol previously) on the slide. Remove bubbles

    31.

    Let dry the slides on the tray in the hood overnight

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