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    Water Extractable Organic Matter (WEOM)

    maggie.bowman

    Published: 2023-03-22 DOI: 10.17504/protocols.io.ewov1o4oylr2/v1
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    Abstract

    The method covers the extraction of water extractable organic matter for soil organic matter characterization using FT-ICR-MS, LCMS, and TOC/TN.

    Steps

    Extraction

    1.

    Weigh out 6g of air-dried soil in triplicate into a labeled 50mL falcon tube

    2.

    Add 30mLof Ultrapure DI (maintaining a 2g to 10mL ratio) using large pipette

    3.

    Place samples onto orbital shaker for 2rpm

    4.

    Once completed centrifuge samples at 6000rpm

    4.1.

    If samples are still cloudy, centrifuge a second time

    5.

    Transfer the supernatant to two centrifuge tubes and do not discard the soil pellet

    5.1.

    5mL in a 15mL centrifuge tube for FT-ICR-MS

    5.2.

    ~20mLin a 50mL centrifuge tube for TOC/TN and LC-MS

    6.

    Acidify the FT-ICR-MS subsample using2µL of concentrated phosphoric acid (37%)

    7.

    Freeze the TOC/TN and LC-MS sample on the side at -20°C until filtration

    8.

    Freeze FT-ICR-MS samples on their side in the -80°C until SPE 

    8.1.

    SPE Protocol:Gilson Automated SPE Protocol

    Sample Filtering (LC-MS and TOC/TN)n

    9.

    Thaw ~20mLsample prior to filtering

    10.

    Using a new clean syringe for each sample, pull up 50mL up Ultrapure DI water

    11.

    Attach a new 0.45 um filter to the syringe and press the water through the filter to rinse the filter.

    12.

    Remove the filter without touching the tip and pull up the ~20mLof thawed sample

    13.

    Re attach the rinsed filter and discard the first 1 - 2mLof sample filtered

    14.

    Filter the sample into two falcon tubes, two 15mL tube labeled for TOC and LC-MS respectively.

    15.

    Filter 10mL of solution into the LC-MS tube and all remaining sample into the TOC/TN tube.

    16.

    If the filter becomes difficult to press sample through, rinse a new filter using a clean (DI ONLY syringe using steps 3 and 4) and attach the rinsed filter to the syringe with sample. Discard the first 1 - 2mL and continue filtering into the respective tubes.

    17.

    Store filtered samples in the freezer prior to analyses.

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